As hospitals and public health organizations switch to using genomic data for testing, searching through genomic data can still take some time. Y Combinator-backed startup, One Codex, wants to help researchers, clinicians and public health officials, who have sequenced more than 100,000 genomes and created petabytes of data, to search this data.
Founded by Nick Greenfield, a former data scientist, and Nik Krumm, who has a PhD in Genome Sciences from the University of Washington, One Codex is a service platform for genomics driven by the genomic sequencing revolution.
Apart from using search technology, the platform also acts as an indexed, curated reference. One Codex, which is currently in open beta, can search its growing database of 30,000 bacteria, viruses and fungi in real time and identify data sets in minutes (millions of DNA base pairs per second).